ApE - A plasmid Editor!

Download/Mac/ApE_OSX_modern_current.dmg Download/Windows/ApE_win_current.zip --- OSX Mavericks+ Click the icons above to download the latest ApE (v2.0.51, January 25 2017 Click here Download/Mac/Ape_OSX_current.zip to download the latest ApE for OSX Lion and earlier Click here to make a voluntary donation in support of ApE. # Important note for OSX users:

ApE - A plasmid Editor alternatives

  • Benchling

  • Benchling is a life science data management and collaboration platform.

    tags: automatic-alignment compatible-with-snapgene-files dna-editor electrophoresis-simulation lab-notebook
  • SnapGene Viewer

  • SnapGene is the first molecular biology software that is easier to use than pen and paper. Now every DNA construct made in your lab can be documented in a rich electronic format… and thanks to the free SnapGene Viewer, the files can be shared with colleagues around the world.

    tags: biology dna plasmid dna-editor pcr
  • Vector NTI

  • Vector NTI is a bioinformatics software package. The current versions are v11.5.1 for Windows/PCs and v7.1 for Macs, but only supporting Mac OS X v10.3 (Panther).Features create, annotate, analyse, and share DNA/protein sequences perform and save BLAST searches design primers for PCR, cloning, sequencing or hybridisation experiments plan cloning and run gels in silico align multiple protein or DNA sequences search NCBI’s Entrez, view, and save DNAs, proteins, and citations edit chromatogram data, assemble into contigsSee also Bioinformatics Vector (molecular biology), Vector DNA, Cloning vector, Expression vector Restriction map Computational biology List of open source bioinformatics software »

    tags: biology dna plasmid
  • Genome Compiler

  • Genome Compiler is an easy to use genetic design platform allowing researchers to manipulate and design everything from single genes to entire genomes.

    tags: biological-visualization biology cad design design-tools
  • DNApy

  • A free and open source GUI toolkit for DNA editing - written in python

    tags: Portable sciences biology dna bioinformatics
  • DNADynamo

  • DNADynamo - for Windows, OSX and Linux. Download it now for abi/scf trace alignments, sub cloning and plasmid management, blast/sequence retrieval, sequence annotation and structure viewing - all in one integrated and easy to use bioinformatics program.

    tags: cloning dna dna-editor plasmid protein
  • Geneious

  • Geneious combines all the major DNA and protein sequence analysis tools into one revolutionary software solution!

    tags: biology dna sequence-alignment visual-editing
  • Chromas

  • Two software applications are available from Technelysium: Chromas and ChromasPro.

    tags: batch-processing dna-editor dna-sequences genetic
  • BioEdit

  • BioEdit is a biological sequence alignment editor written for Windows 95/98/NT/2000/XP/7. An intuitive multiple document interface with convenient features makes alignment and manipulation of sequences relatively easy on your desktop computer. Several sequence manipulation and analysis options and links to external analysis programs facilitate a working environment which allows you to view and manipulate sequences with simple point-and-click operations.

    tags: Discontinued dna plasmid sequence-alignment dna-editor
  • PDRAW32

  • Scientific software for the molecular biologist. Performs virtual DNA cloning, analyses DNA for restriction enzymes, homing enzymes and primer sites, dam and dcm methylation sites, finds and translates open reading frames. Calculates annealing temperatures for PCR. Generates DNA/plasmid plots, virtual agarose gel plots, XY-homology plots - and more!

    tags: automation mapping language-translation sciences annotation
  • Serial Cloner

  • Serial Cloner has been developed to provide a light yet powerful molecular biology software to both Macintosh and Windows users. A Linux version is also distributed. Serial Cloner reads and write DNA Strider-compatible files and import and export files in the universal FASTA format. Serial Cloner also import files saved in the Vector NTI, MacVector, ApE, DNAstar, pDRAW32 and GenBank formats. Import from VectorNTI multi-file format is also supported. Powerful graphical display tools and simple interfaces help the analysis and construction steps in a very intuitive way. Serial Cloner 2.5, handles Annotations and Features both in the sequence and in the Graphic Map and can automatically scan for sequence Features. »

    tags: Discontinued dna-editor molecular-biology
  • VectorFriends

  • VectorFriends combines various types of cloning simulations, sequence analysis and data management into one application.

    tags: annotation biology cloning dna plasmid
  • 4peaks

  • 4Peaks - For Peaks, Four Peaks. The award winning 4Peaks helps molecular biologists to visualize and edit their DNA sequence trace files. Analyzing your sequence has never been so much fun!

    tags: dna dna-editor dna-sequence-editor research sciences
  • BVTech Plasmid

  • BVTech Plasmid is DNA sequence analysis and plasmid drawing software for Windows PCs.You can use it to plan your DNA cloning, draw high quality plasmid maps, analyse your DNA sequencing data, align sequences, and much more. BVTech Plasmid is easy to use, powerful, and affordable for molecular biologists at any level.

    tags: drawing plasmid restriction
  • CLC bio

  • DNA analysis for the workbench

    tags: dna bioinformatics dna-sequences dna-analysis